Access

I access through VSCode remote SSH extension. Just open the remote explorer and add a new SSH host. Then, select the host and connect. It will ask for the password and then it will be connected. To avoid password, I can use the public key authentication (detailed here).

Conda

In CSIRO Bracewell, I can load minoconda using module load miniconda3

As I should not install in home directory, let's change them in conda configuration, as detailed here.

 

Course / Manuals / helpful resources

• https://confluence.csiro.au/display/SC/Useful+information+for+new+users
• https://confluence.csiro.au/display/~mac581/Oddities+of+our+HPC
• https://confluence.csiro.au/display/SC/Interactive+access+and+visualization
• Configure VSCode: https://confluence.csiro.au/display/MLAIFSP/Remote+editing+with+VS+Code+on+bracewell
• Configure Conda: https://confluence.csiro.au/display/IMT/Conda+and+python+in+HPC

Submitting SLURM job

• https://confluence.csiro.au/display/SC/Sample+Slurm+Job+Scripts
• PBS to SLURM
• https://confluence.csiro.au/display/VCCRI/SLURM
• https://confluence.csiro.au/display/SC/Requesting+resources+in+Slurm
• https://confluence.csiro.au/display/SC/Running+jobs+in+an+interactive+batch+shell
• https://confluence.csiro.au/display/GEES/HPC+Cheat+Sheet